Package: crane 0.4.0

Joe Zhu

crane: Supplements the 'gtsummary' Package for Pharmaceutical Reporting

Tables summarizing clinical trial results are often complex and require detailed tailoring prior to submission to a health authority. The 'crane' package supplements the functionality of the 'gtsummary' package for creating these often highly bespoke tables in the pharmaceutical industry.

Authors:Daniel D. Sjoberg [aut], Emily de la Rua [aut], Davide Garolini [aut], Chi Zhang [aut], Abinaya Yogasekaram [ctb], Joe Zhu [cre], Jan Szczypiński [aut], Lluís Revilla Sancho [ctb], F. Hoffmann-La Roche AG [cph, fnd]

crane_0.4.0.tar.gz
crane_0.4.0.zip(r-4.7-any)crane_0.4.0.zip(r-4.6-any)crane_0.4.0.zip(r-4.5-any)
crane_0.4.0.tgz(r-4.6-any)crane_0.4.0.tgz(r-4.5-any)
crane_0.4.0.tar.gz(r-4.7-any)crane_0.4.0.tar.gz(r-4.6-any)
crane_0.4.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
crane/json (API)

# Install 'crane' in R:
install.packages('crane', repos = c('https://insightsengineering.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/insightsengineering/crane/issues

Pkgdown/docs site:https://insightsengineering.github.io

On CRAN:

Conda:

gtreproducible-researchsummary-statistics

7.31 score 15 stars 1 packages 17 scripts 599 downloads 70 exports 88 dependencies

Last updated from:1ffc491d0b (on v0.4.0). Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK304
source / vignettesOK241
linux-releaseOK300
macos-releaseOK272
macos-oldrelOK215
windows-develOK276
windows-releaseOK269
windows-oldrelOK207
wasm-releaseOK145

Exports:%>%add_blank_rowsadd_difference_rowadd_forestadd_grade_columnadd_hierarchical_count_rowadd_label_columnadd_overalladd_proportion_differenceadd_proportion_odds_ratioadjust_stat_columns_wrapannotate_coxphannotate_lineplot_dfannotate_pkc_dfannotate_riskdfannotate_surv_medard_tabulate_abnormal_by_baselinecvdf_add_poolingsfilter_hierarchicalfmt_3sigfmt_pctg_lineplotg_lineplot_tablegeom_cvgeom_meanget_cox_pairwise_dfget_mmrm_resultsgg_kmgg_lineplotgg_mmrm_lineplotgg_pkc_lineplotlabel_roche_numberlabel_roche_percentlabel_roche_pvaluelabel_roche_ratiomodify_header_rm_mdmodify_split_captionmodify_zero_recodepk_imputation_rulespk_param_metadatapk_param_sortpreprocess_lineplot_dataprocess_survfitremove_duplicate_keysreverse_cireverse_rate_differencesort_hierarchicalstyle_roche_numberstyle_roche_percentstyle_roche_pvaluestyle_roche_ratiotbl_baseline_chgtbl_coxphtbl_demographicstbl_hierarchical_incidence_ratetbl_hierarchical_rate_and_counttbl_hierarchical_rate_by_gradetbl_listingtbl_mmrmtbl_null_reporttbl_proportiontbl_rmpttbl_roche_subgroupstbl_roche_summarytbl_shifttbl_survfit_quantilestbl_survfit_timestbl_with_poolstheme_gtsummary_roche

Dependencies:askpassbackportsbase64encbigDbitopsbroombslibcachemcardscardxclicommonmarkcowplotcpp11curldata.tabledigestdplyrevaluatefarverfastmapflextablefontawesomefontBitstreamVerafontLiberationfontquiverfsgdtoolsgenericsggplot2gluegtgtablegtsummaryhighrhtmltoolshtmlwidgetsisobandjquerylibjsonlitejuicyjuiceknitrlabelinglatticelifecyclelitedownmagrittrmarkdownMatrixmemoisemimeofficeropensslpillarpkgconfigpurrrR6raggrappdirsRColorBrewerRcppreactablereactRrlangrmarkdownS7sassscalesstringistringrsurvivalsyssystemfontstextshapingtibbletidyrtidyselecttinytexutf8uuidV8vctrsviridisLitewithrxfunxml2yamlzip

Readme and manuals

Help Manual

Help pageTopics
Add Blank Rowadd_blank_rows
Add a Forest Plot Column to a gtsummary Tableadd_forest
Add row with countsadd_hierarchical_count_row
Add a Label Column to a Tableadd_label_column
Proportion Comparisonsadd_proportion_difference add_proportion_odds_ratio
Adjust Statistics Columns Wrappingadjust_stat_columns_wrap
Annotate Kaplan-Meier Plotannotate_coxph annotate_gg_km annotate_riskdf annotate_surv_med
Annotate Line Plot with Summary Tableannotate_lineplot_df
Annotate PK Plot with Summary Tableannotate_pkc_df
ARD Tabulate Abnormality by Baseline Statusard_tabulate_abnormal_by_baseline
Add custom pooling to an ADaM dataset list - see *DISCLAIMER*df_add_poolings
Generate Table of Pairwise Cox-PH and Log-Rank Resultsget_cox_pairwise_df
Kaplan-Meier Plotgg_km process_survfit
Generate a Summary Line Plot from Raw Datagg_lineplot
Create MMRM Line Plotgg_mmrm_lineplot
Plot Pharmacokinetic Concentration Time Profilegg_pkc_lineplot
Formatting percent and p-valueslabel_roche label_roche_number label_roche_percent label_roche_pvalue label_roche_ratio style_roche_number style_roche_percent style_roche_pvalue style_roche_ratio
Remove Markdown Syntax from Headermodify_header_rm_md
Label and Trim Split Tablesmodify_split_caption
Zero Count Recodemodify_zero_recode
PK Summary Statistic Helperscv fmt_3sig fmt_pct geom_cv geom_mean pk_helpers pk_imputation_rules pk_param_metadata pk_param_sort
Reverse Confidence Intervalreverse_ci
Reverse Rate Differencereverse_rate_difference
Change from Baselineadd_overall.tbl_baseline_chg tbl_baseline_chg
Pairwise Cox Proportional Hazards Tabletbl_coxph
Hierarchical Exposure-Adjusted Incidence Ratesadd_overall.tbl_hierarchical_incidence_rate tbl_hierarchical_incidence_rate
Hierarchical Rates and Countsadd_overall.tbl_hierarchical_rate_and_count tbl_hierarchical_rate_and_count
AE Rates by Highest Toxicity Gradeadd_grade_column add_overall.tbl_hierarchical_rate_by_grade tbl_hierarchical_rate_by_grade
Create listings from a data frameremove_duplicate_keys tbl_listing
Get and display MMRM Results in a Formatted Tableget_mmrm_results tbl_mmrm
Creates null reporttbl_null_report
Proportion Summarytbl_proportion
Risk Management Plan Table (RMPT)add_overall.tbl_rmpt tbl_rmpt
Subgroup Analysestbl_roche_subgroups
Roche Summary Tabletbl_roche_summary
Shift Tableadd_overall.tbl_shift tbl_shift
Survival Quantilesadd_overall.tbl_survfit_quantiles tbl_survfit_quantiles
Survival Timesadd_difference_row.tbl_survfit_times add_overall.tbl_survfit_times tbl_survfit_times
Create a gtsummary table with overlapping pooled columnstbl_with_pools
Roche Themetheme_gtsummary_roche