Package: tern.gee 0.1.4

Joe Zhu

tern.gee: Tables and Graphs for Generalized Estimating Equations (GEE) Model Fits

Generalized estimating equations (GEE) are a popular choice for analyzing longitudinal binary outcomes. This package provides an interface for fitting GEE, currently for logistic regression, within the 'tern' <https://cran.r-project.org/package=tern> framework (Zhu, Sabanés Bové et al., 2023) and tabulate results easily using 'rtables' <https://cran.r-project.org/package=rtables> (Becker, Waddell et al., 2023). It builds on 'geepack' <doi:10.18637/jss.v015.i02> (Højsgaard, Halekoh and Yan, 2006) for the actual GEE model fitting.

Authors:Daniel Sabanés Bové [aut], Joe Zhu [aut, cre], Emily de la Rua [aut], F. Hoffmann-La Roche AG [cph, fnd]

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tern.gee/json (API)
NEWS

# Install 'tern.gee' in R:
install.packages('tern.gee', repos = c('https://insightsengineering.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/insightsengineering/tern.gee/issues

Datasets:
  • fev_data - Example dataset for 'tern.gee' package.

On CRAN:

7 exports 8 stars 2.54 score 117 dependencies 1 dependents 243 downloads

Last updated 26 days agofrom:5e68af7b44 (on v0.1.4)

Exports:a_lsmeans_logisticas.rtablefit_geelsmeanss_lsmeans_logisticsummarize_gee_logisticvars_gee

Dependencies:abindbackportsbase64encbitbit64bootbriobroomcallrcarcarDatacheckmateclicliprcodetoolscolorspacecowplotcpp11crayondescdiffobjdigestdplyremmeansestimabilityevaluatefansifarverfastmapforcatsforeachformattersfsgeeasygeeMgeepackgenericsggformulaggplot2ggridgesglmnetgluegridExtragtablehavenhighrhmshtmltoolsisobanditeratorsjsonlitekinship2knitrlabelinglabelledlatticelifecyclelme4magrittrMASSMatrixMatrixModelsMESSmgcvminqamosaicCoremunsellmvtnormnlmenloptrnnetnumDerivpbkrtestpillarpkgbuildpkgconfigpkgloadpraiseprettyunitsprocessxprogresspspurrrquadprogquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreadrrematch2rlangrprojrootrtablesscalesshapeSparseMstringistringrsurvivalterntestthattibbletidyrtidyselecttzdbutf8vctrsviridisLitevroomwaldowithrxfunyaml

Introduction to tern.gee

Rendered fromtern-gee.Rmdusingknitr::rmarkdownon Jun 12 2024.

Last update: 2023-12-13
Started: 2022-12-05

Readme and manuals

Help Manual

Help pageTopics
'tern.gee' Packagetern.gee-package tern.gee
Example dataset for 'tern.gee' package.fev_data
Fit a GEE Modelfit_gee
Methods for GEE Modelsgee_methods QIC.tern_gee VarCorr.tern_gee
Extract Least Square Means from a GEE Modellsmeans lsmeans.tern_gee_logistic
Tabulation of a GEE Modelas.rtable.tern_gee a_lsmeans_logistic summarize_gee_logistic s_lsmeans_logistic tabulate_gee
Set Variables to Use in GEE Modelvars_gee